STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTRCBeta-transducin repeat containing E3 ubiquitin protein ligase. (429 aa)    
Predicted Functional Partners:
ENSEBUP00000006023
Cullin 1b.
    
 0.996
ENSEBUP00000018834
S-phase kinase-associated protein 1.
    
 0.996
ENSEBUP00000024485
annotation not available
    
 0.993
ENSEBUP00000011013
Cullin 3a.
   
 0.987
ENSEBUP00000027457
annotation not available
    
 0.985
CTNNB1
Catenin beta 1.
    
 0.970
CTNNB1-2
Catenin beta 1.
    
 0.970
ENSEBUP00000011353
CDK2 associated cullin domain 1.
    
 0.965
ENSEBUP00000020956
Glycogen synthase kinase 3 alpha b.
    
 0.957
ENSEBUP00000023655
annotation not available
    
 0.945
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.