STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000018713annotation not available (239 aa)    
Predicted Functional Partners:
ENSEBUP00000026424
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.998
ENSEBUP00000012221
Structure specific recognition protein 1a.
   
 0.932
ENSEBUP00000016434
annotation not available
 
     0.928
CDC73
Cell division cycle 73.
   
 0.917
ENSEBUP00000010707
SPT4 homolog, DSIF elongation factor subunit.
    
 0.906
ENSEBUP00000026402
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.906
ENSEBUP00000005254
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.905
ENSEBUP00000006435
annotation not available
   
 0.892
ENSEBUP00000004241
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.882
ENSEBUP00000026916
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.871
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.