STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000019847annotation not available (167 aa)    
Predicted Functional Partners:
ENSEBUP00000021217
Golgi transport 1Bb.
   
 
 0.801
ENSEBUP00000013896
Syntaxin 5A.
    
 
 0.697
ENSEBUP00000015426
annotation not available
    
 
 0.697
ENSEBUP00000012564
YKT6 v-SNARE homolog (S. cerevisiae).
    
 
 0.572
ENSEBUP00000025754
annotation not available
   
 
 0.551
RAB6B
RAB6B, member RAS oncogene family.
    
 
 0.439
ENSEBUP00000011444
annotation not available
    
 
 0.439
RAB6B-2
RAB6B, member RAS oncogene family.
    
 
 0.439
ENSEBUP00000008974
Syntaxin 16.
    
   0.435
ENSEBUP00000009624
annotation not available
    
   0.434
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.