ENSEBUP00000020114 protein (Eptatretus burgeri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSEBUP00000020114

annotation not available (450 aa)

Predicted Functional Partners:

ENSEBUP00000005138

0.958

ENSEBUP00000012891

0.958

ENSEBUP00000016055

0.958

ENSEBUP00000009845

0.920

ENSEBUP00000003015

0.909

ENSEBUP00000025517

0.856

ENSEBUP00000016963

0.832

ENSEBUP00000018631

0.795

ENSEBUP00000009772

0.793

ENSEBUP00000022455

0.793

Your Current Organism:

Eptatretus burgeri

NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSEBUP00000003015	ENSEBUP00000009772	annotation not available	annotation not available	0.798
ENSEBUP00000003015	ENSEBUP00000009845	annotation not available	annotation not available	0.532
ENSEBUP00000003015	ENSEBUP00000016963	annotation not available	annotation not available	0.753
ENSEBUP00000003015	ENSEBUP00000020114	annotation not available	annotation not available	0.909
ENSEBUP00000003015	ENSEBUP00000022455	annotation not available	annotation not available	0.798
ENSEBUP00000003015	ENSEBUP00000025517	annotation not available	Janus kinase 2b.	0.837
ENSEBUP00000005138	ENSEBUP00000009772	annotation not available	annotation not available	0.705
ENSEBUP00000005138	ENSEBUP00000009845	annotation not available	annotation not available	0.792
ENSEBUP00000005138	ENSEBUP00000016963	annotation not available	annotation not available	0.457
ENSEBUP00000005138	ENSEBUP00000020114	annotation not available	annotation not available	0.958
ENSEBUP00000005138	ENSEBUP00000022455	annotation not available	annotation not available	0.705
ENSEBUP00000005138	ENSEBUP00000025517	annotation not available	Janus kinase 2b.	0.857
ENSEBUP00000009772	ENSEBUP00000003015	annotation not available	annotation not available	0.798
ENSEBUP00000009772	ENSEBUP00000005138	annotation not available	annotation not available	0.705
ENSEBUP00000009772	ENSEBUP00000009845	annotation not available	annotation not available	0.779
ENSEBUP00000009772	ENSEBUP00000012891	annotation not available	annotation not available	0.705
ENSEBUP00000009772	ENSEBUP00000016055	annotation not available	annotation not available	0.705
ENSEBUP00000009772	ENSEBUP00000016963	annotation not available	annotation not available	0.618
ENSEBUP00000009772	ENSEBUP00000018631	annotation not available	annotation not available	0.609
ENSEBUP00000009772	ENSEBUP00000020114	annotation not available	annotation not available	0.793