STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000021250annotation not available (113 aa)    
Predicted Functional Partners:
ENSEBUP00000001441
Mitochondrial ribosomal protein L16.
   
 0.935
ENSEBUP00000000521
Mitochondrial ribosomal protein L2.
   
 
 0.746
MRPS14
Mitochondrial ribosomal protein S14.
    
 0.700
ENSEBUP00000024500
annotation not available
    
 
 0.648
MRPL20
Mitochondrial ribosomal protein L20.
    
 
 0.642
ENSEBUP00000022343
Mitochondrial ribosomal protein S5.
    
  0.639
ENSEBUP00000005128
Mitochondrial ribosomal protein S12.
    
 0.636
ENSEBUP00000001001
annotation not available
    
   0.627
ENSEBUP00000001325
Mitochondrial ribosomal protein S6.
    
   0.627
ENSEBUP00000003770
Mitochondrial ribosomal protein L43.
    
   0.627
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.