STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000021316annotation not available (170 aa)    
Predicted Functional Partners:
ENSEBUP00000024564
annotation not available
    
 
 0.770
ENSEBUP00000000520
Aldehyde dehydrogenase 18 family, member A1.
      
 0.599
ENSEBUP00000006784
annotation not available
    
   0.502
ENSEBUP00000017437
RAN, member RAS oncogene family.
    
   0.502
IPO13
Importin 13.
    
 
 0.500
ENSEBUP00000011972
Exportin, tRNA (nuclear export receptor for tRNAs).
   
  
 0.465
ENSEBUP00000026122
Exportin 7.
   
  
 0.461
ENSEBUP00000017854
CSE1 chromosome segregation 1-like (yeast).
      
 0.446
ENSEBUP00000018813
Deoxyhypusine hydroxylase/monooxygenase.
      
 0.420
ENSEBUP00000018135
Deoxyhypusine synthase.
      
 0.416
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.