STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000022375annotation not available (185 aa)    
Predicted Functional Partners:
ENSEBUP00000019695
poly(A) specific ribonuclease subunit PAN3.
    
 0.903
ENSEBUP00000015398
Eukaryotic translation initiation factor 4A1B.
   
 0.896
ENSEBUP00000004035
poly(A) specific ribonuclease subunit PAN2.
    
 0.880
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.818
ENSEBUP00000002419
annotation not available
   
 0.817
ENSEBUP00000003951
annotation not available
    
 0.810
ENSEBUP00000008658
Eukaryotic translation initiation factor 4E family member 3.
    
 0.810
ENSEBUP00000023982
Eukaryotic translation initiation factor 4E family member 1B.
    
 0.810
ENSEBUP00000005464
Eukaryotic translation initiation factor 4A3.
   
 0.797
ENSEBUP00000006846
Ribosomal protein S3A.
   
 0.780
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.