STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000023382General transcription factor IIH, polypeptide 5. (67 aa)    
Predicted Functional Partners:
ENSEBUP00000008989
General transcription factor IIH, polypeptide 4.
    
 0.999
ENSEBUP00000015510
Excision repair cross-complementation group 3.
   
 0.999
ENSEBUP00000004704
General transcription factor IIH, polypeptide 1.
    
 0.996
ENSEBUP00000021942
General transcription factor IIH, polypeptide 3.
    
 0.996
ENSEBUP00000008916
Cyclin H.
    
 0.995
ENSEBUP00000021013
Excision repair cross-complementation group 2.
    
 0.995
ENSEBUP00000017633
General transcription factor IIH, polypeptide 2.
    
 0.992
ENSEBUP00000018636
MNAT1 component of CDK activating kinase.
    
 0.982
ENSEBUP00000027585
General transcription factor IIF, polypeptide 1.
    
  0.978
ENSEBUP00000017736
General transcription factor IIE, polypeptide 2, beta.
    
 0.973
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.