STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000023523annotation not available (290 aa)    
Predicted Functional Partners:
ENSEBUP00000026424
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.809
ENSEBUP00000001417
annotation not available
    
 0.800
ENSEBUP00000010084
annotation not available
    
  0.709
ENSEBUP00000015996
RAN binding protein 2.
    
 0.698
ENSEBUP00000017122
Lysine (K)-specific demethylase 6A.
    
 0.675
ENSEBUP00000015368
Retinoblastoma binding protein 5.
    
 0.671
ENSEBUP00000015502
annotation not available
    
 0.671
ENSEBUP00000001478
annotation not available
    
 0.647
ENSEBUP00000010513
Nucleoporin 107.
    
 0.647
ENSEBUP00000027495
annotation not available
    
 0.647
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.