STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000023622annotation not available (800 aa)    
Predicted Functional Partners:
ENSEBUP00000006546
Splicing factor 3b, subunit 1.
   
 0.984
ENSEBUP00000001487
Splicing factor 3a, subunit 1.
   
  0.983
ENSEBUP00000002850
Small nuclear ribonucleoprotein D2 polypeptide.
    
  0.980
ENSEBUP00000004487
annotation not available
    
 0.980
ENSEBUP00000020673
annotation not available
    
  0.980
ENSEBUP00000005833
LUC7-like (S. cerevisiae).
   
  0.978
ENSEBUP00000027705
Microfibril associated protein 1.
   
 0.977
ENSEBUP00000020286
annotation not available
   
 0.966
ENSEBUP00000025051
annotation not available
    
  0.959
ENSEBUP00000021841
Crooked neck pre-mRNA splicing factor 1.
    
  0.957
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.