STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000023894annotation not available (229 aa)    
Predicted Functional Partners:
ENSEBUP00000004273
annotation not available
    
 
 0.749
ENSEBUP00000025173
annotation not available
    
 
 0.749
ENSEBUP00000003347
Rab geranylgeranyltransferase subunit alpha.
    
 0.737
ENSEBUP00000015204
CHM Rab escort protein.
    
 0.706
ENSEBUP00000024006
Ankyrin repeat domain 27 (VPS9 domain).
    
 
 0.643
ENSEBUP00000007192
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.630
ENSEBUP00000004579
annotation not available
    
 0.565
ENSEBUP00000017588
GDP dissociation inhibitor 2.
    
 0.565
ENSEBUP00000024126
annotation not available
    
 0.565
ENSEBUP00000015815
annotation not available
     
 0.564
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.