STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000024067ATP-binding cassette, sub-family B (MDR/TAP), member 7. (728 aa)    
Predicted Functional Partners:
ENSEBUP00000021593
ATP-binding cassette, sub-family B (MDR/TAP), member 10.
    
0.829
ENSEBUP00000008082
Nucleotide binding protein 1 (MinD homolog, E. coli).
    
 0.776
ENSEBUP00000011034
Nucleotide binding protein 2 (MinD homolog, E. coli).
    
 0.776
ENSEBUP00000018459
Nucleotide binding protein-like.
    
 0.756
ENSEBUP00000011020
ATP-binding cassette, sub-family B (MDR/TAP), member 8.
    
0.737
ENSEBUP00000025979
Ferrochelatase.
   
 
 0.690
ENSEBUP00000016456
Glutaredoxin 5 homolog (S. cerevisiae).
    
 
 0.683
ENSEBUP00000018698
ATP-binding cassette, sub-family F (GCN20), member 1.
     
0.666
ENSEBUP00000027819
ATP-binding cassette, sub-family E (OABP), member 1.
      
 0.656
ENSEBUP00000006913
Solute carrier family 25 member 28.
    
 
 0.635
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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