STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000024156Cylindromatosis (turban tumor syndrome), b. (975 aa)    
Predicted Functional Partners:
ENSEBUP00000014457
annotation not available
    
 0.991
ENSEBUP00000010765
annotation not available
    
 0.985
ENSEBUP00000011534
annotation not available
    
 0.984
ENSEBUP00000004699
annotation not available
    
  0.983
ENSEBUP00000008565
annotation not available
   
 0.978
ENSEBUP00000009713
TNF receptor-associated factor 6.
    
 0.974
RNF31
Ring finger protein 31.
    
 0.972
ENSEBUP00000021528
annotation not available
    
 0.963
ENSEBUP00000005373
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.919
ENSEBUP00000017704
annotation not available
    
 0.904
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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