Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSEBUP00000004049 | ENSEBUP00000006279 | REST corepressor 3. | Histone deacetylase 3. | 0.834 |
ENSEBUP00000004049 | ENSEBUP00000009157 | REST corepressor 3. | annotation not available | 0.888 |
ENSEBUP00000004049 | ENSEBUP00000010728 | REST corepressor 3. | Histone deacetylase 8. | 0.862 |
ENSEBUP00000004049 | ENSEBUP00000011543 | REST corepressor 3. | annotation not available | 0.862 |
ENSEBUP00000004049 | ENSEBUP00000017235 | REST corepressor 3. | C-terminal binding protein 1. | 0.667 |
ENSEBUP00000004049 | ENSEBUP00000023243 | REST corepressor 3. | annotation not available | 0.793 |
ENSEBUP00000004049 | ENSEBUP00000024198 | REST corepressor 3. | Lysine (K)-specific demethylase 1a. | 0.987 |
ENSEBUP00000004049 | ENSEBUP00000027380 | REST corepressor 3. | annotation not available | 0.921 |
ENSEBUP00000006279 | ENSEBUP00000004049 | Histone deacetylase 3. | REST corepressor 3. | 0.834 |
ENSEBUP00000006279 | ENSEBUP00000009157 | Histone deacetylase 3. | annotation not available | 0.817 |
ENSEBUP00000006279 | ENSEBUP00000010728 | Histone deacetylase 3. | Histone deacetylase 8. | 0.753 |
ENSEBUP00000006279 | ENSEBUP00000011543 | Histone deacetylase 3. | annotation not available | 0.746 |
ENSEBUP00000006279 | ENSEBUP00000017235 | Histone deacetylase 3. | C-terminal binding protein 1. | 0.887 |
ENSEBUP00000006279 | ENSEBUP00000018055 | Histone deacetylase 3. | REST corepressor 3. | 0.834 |
ENSEBUP00000006279 | ENSEBUP00000024198 | Histone deacetylase 3. | Lysine (K)-specific demethylase 1a. | 0.931 |
ENSEBUP00000006279 | ENSEBUP00000027380 | Histone deacetylase 3. | annotation not available | 0.794 |
ENSEBUP00000009121 | ENSEBUP00000024198 | annotation not available | Lysine (K)-specific demethylase 1a. | 0.953 |
ENSEBUP00000009121 | ENSEBUP00000027380 | annotation not available | annotation not available | 0.415 |
ENSEBUP00000009157 | ENSEBUP00000004049 | annotation not available | REST corepressor 3. | 0.888 |
ENSEBUP00000009157 | ENSEBUP00000006279 | annotation not available | Histone deacetylase 3. | 0.817 |
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