STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000024789Vacuolar protein sorting 4 homolog A. (173 aa)    
Predicted Functional Partners:
ENSEBUP00000001385
Charged multivesicular body protein 6a.
    
 0.962
ENSEBUP00000007746
Vesicle (multivesicular body) trafficking 1.
   
 0.962
ENSEBUP00000019024
annotation not available
 
     0.948
ENSEBUP00000014366
IST1 factor associated with ESCRT-III.
   
 0.934
ENSEBUP00000010729
Charged multivesicular body protein 2A.
    
 0.931
ENSEBUP00000017864
Transmembrane 9 superfamily member 1.
   
 0.906
ENSEBUP00000024328
Transmembrane 9 superfamily member 1.
   
 0.906
ENSEBUP00000005916
Charged multivesicular body protein 2Bb.
   
 0.905
ENSEBUP00000002380
Charged multivesicular body protein 3.
   
 0.900
ENSEBUP00000000560
annotation not available
    
 0.896
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.