STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000025804annotation not available (301 aa)    
Predicted Functional Partners:
ENSEBUP00000018077
annotation not available
 
     0.932
MARCHF6
Membrane associated ring-CH-type finger 6.
 
     0.917
ENSEBUP00000006611
CCR4-NOT transcription complex, subunit 2.
    
 0.875
ENSEBUP00000026698
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast).
    
 0.780
ENSEBUP00000002322
annotation not available
    
 
 0.764
ENSEBUP00000008090
Derlin 3.
    
 0.756
ENSEBUP00000009131
annotation not available
    
 0.733
ENSEBUP00000013044
Synovial apoptosis inhibitor 1, synoviolin.
    
 0.733
SPATA5
Spermatogenesis associated 5.
    
 0.724
ENSEBUP00000019934
Valosin containing protein.
    
 0.724
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.