STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000026161annotation not available (480 aa)    
Predicted Functional Partners:
ENSEBUP00000015996
RAN binding protein 2.
    
 0.999
ENSEBUP00000001226
Zgc:193690.
    
 0.998
ENSEBUP00000010513
Nucleoporin 107.
   
 0.997
ENSEBUP00000004119
Nucleoporin 93.
    
 0.996
ENSEBUP00000004766
annotation not available
    
 0.996
ENSEBUP00000009871
SEH1-like (S. cerevisiae).
    
 0.996
ENSEBUP00000019651
Nucleoporin 88.
    
 0.996
ENSEBUP00000012822
Nucleoporin 133.
   
 0.995
ENSEBUP00000009884
Nucleoporin 62 like.
   
 0.992
ENSEBUP00000008290
Nucleoporin 50.
   
 
 0.989
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.