STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000027824annotation not available (304 aa)    
Predicted Functional Partners:
ENSEBUP00000007524
annotation not available
   
 0.953
ENSEBUP00000019925
Coiled-coil domain containing 22.
    
 0.951
ENSEBUP00000007197
COMM domain containing 4.
    
 0.938
COMMD10
COMM domain containing 10.
   
 0.938
ENSEBUP00000000463
annotation not available
    
 0.930
ENSEBUP00000025511
COMM domain containing 5.
   
 0.930
ENSEBUP00000000981
annotation not available
    
 0.915
ENSEBUP00000008242
annotation not available
    
 0.892
ENSEBUP00000024734
COMM domain containing 3.
    
 0.883
ENSEBUP00000005717
annotation not available
   
 0.813
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.