STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEBUP00000027850Phosphodiesterase 3B. (1159 aa)    
Predicted Functional Partners:
ENSEBUP00000004974
Adenylate cyclase 5.
    
 0.875
ENSEBUP00000015202
Adenylate cyclase 1b.
    
 0.867
ENSEBUP00000017484
Adenylate cyclase 8 (brain).
    
 0.861
ENSEBUP00000024019
annotation not available
    
 0.861
ADCY4
Adenylate cyclase 4.
    
 0.855
ENSEBUP00000011085
annotation not available
   
 0.854
ENSEBUP00000026894
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
  0.851
ENSEBUP00000006238
WD repeat domain 41.
     
 0.846
ENSEBUP00000007954
annotation not available
    
 0.838
ENSEBUP00000015738
RAP1A, member of RAS oncogene family a.
    
 0.838
Your Current Organism:
Eptatretus burgeri
NCBI taxonomy Id: 7764
Other names: Bdellostoma burgeri, E. burgeri, inshore hagfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.