STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntrXUnannotated protein. (471 aa)    
Predicted Functional Partners:
ntrY
Unannotated protein.
 0.995
EHRUM2_02980
Unannotated protein.
 
    
 0.725
EHRUM2_01360
Unannotated protein.
  
 0.689
EHRUM2_02510
Unannotated protein.
 0.618
virA
Unannotated protein.
 
 
 0.592
putA
Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.483
pal
Unannotated protein.
  
  
 0.471
dksA
Unannotated protein.
 
  
 0.455
rpoD
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
   
 0.434
ftsQ
Unannotated protein; Essential cell division protein.
  
    0.428
Your Current Organism:
Ehrlichia ruminantium
NCBI taxonomy Id: 779
Other names: Cowdria ruminantium, E. ruminantium, Kurlovia ruminantium, Nicollea ruminantium, Rickettsia ruminantium, heartwater rickettsia, strain Welgevonden
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.