STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHRUM2_09620Unannotated protein. (182 aa)    
Predicted Functional Partners:
bamA
Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
  
 0.964
EHRUM2_09600
Unannotated protein.
  
    0.873
fabZ
Unannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
    0.866
pal
Unannotated protein.
  
 
 0.800
EHRUM2_01290
Unannotated protein.
  
    0.685
EHRUM2_07700
Unannotated protein.
  
  
 0.683
purH
Unannotated protein.
       0.644
EHRUM2_01060
Unannotated protein.
 
     0.596
rpsM
Unannotated protein; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.541
EHRUM2_02320
Unannotated protein.
 
     0.528
Your Current Organism:
Ehrlichia ruminantium
NCBI taxonomy Id: 779
Other names: Cowdria ruminantium, E. ruminantium, Kurlovia ruminantium, Nicollea ruminantium, Rickettsia ruminantium, heartwater rickettsia, strain Welgevonden
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.