STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
fabABeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (185 aa)    
Predicted Functional Partners:
Xaut_0053
PFAM: Beta-ketoacyl synthase; KEGG: bra:BRADO0062 3-oxoacyl-[acyl-carrier-protein] synthase I (beta-ketoacyl-ACP synthase I) (KAS I); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.968
Xaut_0052
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0347 enoyl-(acyl carrier protein) reductase.
  
 
 0.955
Xaut_3256
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bvi:Bcep1808_6177 short-chain dehydrogenase/reductase SDR.
  
 
 0.933
Xaut_4143
KEGG: rpd:RPD_1312 enoyl-acyl carrier protein reductase.
  
 
 0.933
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 
 0.932
Xaut_1262
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rpe:RPE_2022 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ.
  
 
 0.930
Xaut_1016
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; KR domain protein; KEGG: rle:RL3779 putative short-chain dehydrogenase.
  
 0.924
Xaut_1358
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pde:Pden_1255 short-chain dehydrogenase/reductase SDR.
  
 0.924
Xaut_1622
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bov:BOV_A0339 putative 3-oxoacyl-(acyl-carrier protein) reductase.
  
 0.924
Xaut_1623
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmb:BruAb2_0030 hypothetical 3-oxoacyl-(acyl-carrier-protein) reductase.
  
 0.924
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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