Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Xaut_0100PFAM: Rhodanese domain protein; KEGG: bra:BRADO5429 thiosulfate sulfurtransferase (rhodanese). (286 aa)    
Predicted Functional Partners:
Xaut_4545
TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: nha:Nham_2072 cystathionine beta-lyase.
 
 
 0.942
Xaut_2614
PFAM: Rhodanese domain protein; KEGG: bra:BRADO2770 putative thiosulfate sulfurtransferase (rhodanese-like protein).
  
  
 
0.928
Xaut_0108
Aminotransferase class V; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
 0.918
Xaut_4470
PFAM: aminotransferase class V; KEGG: rpa:RPA2463 putative cysteine desulfurase, nifS homolog.
  
 0.918
Xaut_1395
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.915
Xaut_3395
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; KEGG: eba:ebA3193 putative oxidoreductase, FAD-binding.
     
 0.915
Xaut_1071
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: rpa:RPA2003 probable cytochrome c precursor.
  
 
 0.913
Xaut_2498
FAD-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; Fe-S cluster domain protein; KEGG: rpe:RPE_1259 FAD-binding domain protein.
     
 0.913
Xaut_1397
PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rpc:RPC_4013 nitrite and sulphite reductase 4Fe-4S region.
    
 0.910
Xaut_0255
PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: nha:Nham_3394 twin-arginine translocation pathway signal.
  
 
 0.909
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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