STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_0145TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: bbt:BBta_5881 putative arsenate reductase (nitrogenase-associated protein); Belongs to the ArsC family. (143 aa)    
Predicted Functional Partners:
Xaut_0146
KEGG: bbt:BBta_2171 hypothetical protein.
   
 0.973
Xaut_0147
PFAM: Rhodanese domain protein; Ankyrin; KEGG: bbt:BBta_2170 putative thiosulfate sulfurtransferase.
 
  
 0.831
Xaut_0144
PFAM: response regulator receiver; KEGG: bbt:BBta_5880 putative transcriptional regulatory protein (protein CheY).
       0.782
Xaut_0093
TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: bbt:BBta_5920 nitrogenase molybdenum-iron protein NifX.
 
   
 0.769
Xaut_0114
KEGG: bbt:BBta_5901 hypothetical protein.
 
   
 0.763
Xaut_0094
PFAM: protein of unknown function DUF269; KEGG: bbt:BBta_5919 hypothetical protein.
 
     0.744
Xaut_0116
PFAM: NifZ family protein; KEGG: bbt:BBta_5899 putative NifZ protein (NifZ domain).
  
  
 0.742
Xaut_0096
TIGRFAM: Ferredoxin III 4[4Fe-4S] nif-specific; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bra:BRADO5432 ferredoxin-3 (ferredoxin III) (FdIII).
  
     0.726
Xaut_0111
TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; KEGG: bbt:BBta_5904 nitrogenase FeMo cofactor biosynthesis protein NifB.
 
   
 0.724
Xaut_0095
PFAM: protein of unknown function DUF683; KEGG: bra:BRADO5433 conserved hypothetical protein (DUF683).
 
     0.716
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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