STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_0202Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbt:BBta_1991 response regulator in two-component regulatory system with PhoR (or CreC). (233 aa)    
Predicted Functional Partners:
Xaut_0196
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpb:RPB_0775 periplasmic sensor signal transduction histidine kinase.
 0.990
Xaut_1406
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_3045 putative sensor histidine kinase with a PAS domain.
 
 0.905
Xaut_3145
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rle:pRL110269 putative GGDEF family regulator.
 
 
  
 0.900
Xaut_2488
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aav:Aave_0806 diguanylate cyclase with PAS/PAC sensor.
 
 
  
 0.890
Xaut_3322
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mlo:mlr0562 histidine kinase sensor protein.
 
 0.857
Xaut_2195
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: mca:MCA1583 GGDEF domain protein.
 
 
  
 0.854
Xaut_1281
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: nha:Nham_3295 periplasmic sensor signal transduction histidine kinase.
 
 
 0.845
Xaut_2263
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: bcn:Bcen_4118 periplasmic sensor signal transduction histidine kinase.
 
 0.844
Xaut_1804
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rde:RD1_1156 sensor protein ResE, putative.
 
 0.833
Xaut_1532
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; KEGG: mlo:mll7952 two-component system, sensor protein.
 
 0.831
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.