Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Xaut_0806 | Xaut_0807 | Xaut_0806 | Xaut_0807 | PFAM: domain of unknown function DUF1738; KEGG: pde:Pden_1544 domain of unknown function DUF1738. | KEGG: bxe:Bxe_A1808 hypothetical protein. | 0.427 |
Xaut_0807 | Xaut_0806 | Xaut_0807 | Xaut_0806 | KEGG: bxe:Bxe_A1808 hypothetical protein. | PFAM: domain of unknown function DUF1738; KEGG: pde:Pden_1544 domain of unknown function DUF1738. | 0.427 |
Xaut_0807 | Xaut_0809 | Xaut_0807 | Xaut_0809 | KEGG: bxe:Bxe_A1808 hypothetical protein. | KEGG: mes:Meso_3808 hypothetical protein. | 0.524 |
Xaut_0807 | Xaut_0810 | Xaut_0807 | Xaut_0810 | KEGG: bxe:Bxe_A1808 hypothetical protein. | KEGG: mes:Meso_3807 hypothetical protein. | 0.524 |
Xaut_0807 | dnaE2 | Xaut_0807 | Xaut_0808 | KEGG: bxe:Bxe_A1808 hypothetical protein. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.524 |
Xaut_0809 | Xaut_0807 | Xaut_0809 | Xaut_0807 | KEGG: mes:Meso_3808 hypothetical protein. | KEGG: bxe:Bxe_A1808 hypothetical protein. | 0.524 |
Xaut_0809 | Xaut_0810 | Xaut_0809 | Xaut_0810 | KEGG: mes:Meso_3808 hypothetical protein. | KEGG: mes:Meso_3807 hypothetical protein. | 0.978 |
Xaut_0809 | dnaE2 | Xaut_0809 | Xaut_0808 | KEGG: mes:Meso_3808 hypothetical protein. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.969 |
Xaut_0810 | Xaut_0807 | Xaut_0810 | Xaut_0807 | KEGG: mes:Meso_3807 hypothetical protein. | KEGG: bxe:Bxe_A1808 hypothetical protein. | 0.524 |
Xaut_0810 | Xaut_0809 | Xaut_0810 | Xaut_0809 | KEGG: mes:Meso_3807 hypothetical protein. | KEGG: mes:Meso_3808 hypothetical protein. | 0.978 |
Xaut_0810 | dnaE2 | Xaut_0810 | Xaut_0808 | KEGG: mes:Meso_3807 hypothetical protein. | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.965 |
dnaE2 | Xaut_0807 | Xaut_0808 | Xaut_0807 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | KEGG: bxe:Bxe_A1808 hypothetical protein. | 0.524 |
dnaE2 | Xaut_0809 | Xaut_0808 | Xaut_0809 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | KEGG: mes:Meso_3808 hypothetical protein. | 0.969 |
dnaE2 | Xaut_0810 | Xaut_0808 | Xaut_0810 | DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | KEGG: mes:Meso_3807 hypothetical protein. | 0.965 |