STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_0891PFAM: inner-membrane translocator; KEGG: rpc:RPC_0678 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (320 aa)    
Predicted Functional Partners:
Xaut_0892
PFAM: inner-membrane translocator; KEGG: rpa:RPA4020 possible branched-chain amino acid transport system permease protein.
 
 0.999
Xaut_0889
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0676 ABC transporter related.
  
 0.991
Xaut_0890
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0677 ABC transporter related.
  
 0.991
Xaut_1619
PFAM: inner-membrane translocator; KEGG: bov:BOV_A0336 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.978
Xaut_3900
PFAM: inner-membrane translocator; KEGG: bov:BOV_1725 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.969
Xaut_2705
PFAM: inner-membrane translocator; KEGG: bja:bll3662 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.968
Xaut_0044
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_0357 ABC transporter related.
  
 0.962
Xaut_1353
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1013 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.958
Xaut_0641
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3357 ABC transporter ATP-binding protein.
  
 0.957
Xaut_1046
PFAM: inner-membrane translocator; KEGG: bbr:BB4292 branched-chain amino acid transport system permease.
  
 0.957
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.