STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1012PFAM: Patatin; KEGG: mxa:MXAN_4295 patatin-like phospholipase family protein. (328 aa)    
Predicted Functional Partners:
Xaut_1009
TIGRFAM: methyltransferase FkbM family; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Non-ribosomal peptide synthetase; KEGG: ana:all2645 peptide synthetase.
 
     0.789
Xaut_1010
PFAM: condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mva:Mvan_1003 beta-ketoacyl synthase.
   
 
 0.787
Xaut_1008
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mxa:MXAN_4528 polyketide synthase.
   
 
 0.782
Xaut_1011
PFAM: AMP-dependent synthetase and ligase; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; KEGG: sen:SACE_4285 AMP-dependent synthetase and ligase.
     
 0.777
Xaut_1007
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; KEGG: mxa:MXAN_4526 polyketide synthase type I.
   
 
 0.774
Xaut_1006
PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: ava:Ava_3987 AMP-dependent synthetase and ligase.
       0.741
Xaut_0555
PFAM: Patatin; KEGG: rpd:RPD_2292 patatin.
  
     0.546
Xaut_1013
PFAM: alpha/beta hydrolase fold; KEGG: rle:RL1500 putative hydrolase.
  
  
 0.543
Xaut_3568
KEGG: bja:bll2378 hypothetical protein.
  
     0.485
Xaut_1014
PFAM: 4'-phosphopantetheinyl transferase; KEGG: rso:RSc1804 hypothetical protein; Belongs to the P-Pant transferase superfamily.
       0.459
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.