STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1078PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sme:SMb20986 putative nitrate reductase, large subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (897 aa)    
Predicted Functional Partners:
Xaut_1080
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mes:Meso_1451 nitrite reductase (NAD(P)H), large subunit.
 
 0.999
Xaut_2500
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rpb:RPB_1755 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 0.998
Xaut_1079
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mlo:mlr2863 nitrite reductase small subunit.
 
 
 0.994
Xaut_1082
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_2266 regulatory proteins, AsnC/Lrp.
 
  
 0.991
Xaut_1083
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_4170 nitrate ABC transporter, permease component.
 
  
 0.991
Xaut_1084
KEGG: mag:amb0537 ABC-type nitrate/sulfonate/bicarbonate transport systems.
 
 
 0.990
Xaut_2504
KEGG: atc:AGR_L_1886 nitrate-binding protein nrtA precursor, periplasmic.
 
 
 0.975
Xaut_2498
FAD-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; Fe-S cluster domain protein; KEGG: rpe:RPE_1259 FAD-binding domain protein.
 
 
 0.968
Xaut_2502
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1758 nitrate transport ATP-binding subunits C and D.
 
  
 0.959
Xaut_0170
PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rle:pRL110293 putative formate hydrogenlyase subunit 5 precursor.
  
 
 0.955
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.