STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1134PFAM: ring hydroxylating dioxygenase alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: pfl:PFL_3858 ring-hydroxylating dioxygenase, alpha subunit. (462 aa)    
Predicted Functional Partners:
Xaut_1135
Benzoate 1,2-dioxygenase; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: pfl:PFL_3857 ring-hydroxylating dioxygenase, beta subunit.
 
 0.999
Xaut_1136
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ppu:PP_3163 benzoate dioxygenase, ferredoxin reductase component.
 
 
 0.995
Xaut_1051
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: aeh:Mlg_2459 oxidoreductase FAD-binding domain protein.
 
 
 0.983
Xaut_4355
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nar:Saro_3837 short-chain dehydrogenase/reductase SDR.
 
 
 0.978
Xaut_1133
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: reu:Reut_A1705 catechol dioxygenase, N-terminal.
  
 0.925
Xaut_1132
TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pde:Pden_1174 muconate and chloromuconate cycloisomerases.
 
  
 0.871
Xaut_1121
PFAM: Muconolactone delta-isomerase; KEGG: ajs:Ajs_0141 muconolactone delta-isomerase.
 
  
 0.851
Xaut_4357
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: reu:Reut_A1705 catechol dioxygenase, N-terminal.
  
 0.846
Xaut_4358
TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bur:Bcep18194_C7044 mandelate racemase/muconate lactonizing enzyme.
 
  
 0.802
Xaut_1131
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_1173 transcriptional regulator, LysR family.
 
   
 0.744
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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