Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Xaut_1197 | Xaut_1198 | TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; KEGG: rru:Rru_A3062 methylmalonyl-CoA mutase-like. | KEGG: mmc:Mmcs_5167 hypothetical protein. | 0.528 |
Xaut_1198 | Xaut_1197 | KEGG: mmc:Mmcs_5167 hypothetical protein. | TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; KEGG: rru:Rru_A3062 methylmalonyl-CoA mutase-like. | 0.528 |
Xaut_1198 | Xaut_1199 | KEGG: mmc:Mmcs_5167 hypothetical protein. | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00115 hypothetical protein. | 0.473 |
Xaut_1199 | Xaut_1198 | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc00115 hypothetical protein. | KEGG: mmc:Mmcs_5167 hypothetical protein. | 0.473 |