STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1210PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_2610 putative transport system permease protein of aliphatic sulfonates ABC transporter. (315 aa)    
Predicted Functional Partners:
Xaut_1209
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_4320 ABC transporter related.
 
 0.996
Xaut_1211
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_2507 putative ABC transporter, substrate binding protein.
 
 0.996
Xaut_3466
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_3297 putative sulfonate ABC transporter, periplasmic-binding protein.
 
 0.984
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.979
Xaut_3458
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN3440 ABC transporter, ATP-binding protein.
 
 0.978
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 0.959
Xaut_1783
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr6201 ABC transporter ATP-binding protein.
 
 0.957
Xaut_3460
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: pau:PA14_19500 putative sulfonate binding protein.
 
 
 0.941
ssuD-2
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 0.927
Xaut_3459
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB1071 putative permease component of ABC transporter.
 
 
 
0.926
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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