STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1367PFAM: metallophosphoesterase; KEGG: rpb:RPB_4196 metallophosphoesterase. (301 aa)    
Predicted Functional Partners:
Xaut_1636
KEGG: bja:bll5549 hypothetical protein.
  
     0.739
Xaut_3489
KEGG: rpd:RPD_3670 flagellar export FliJ.
  
     0.661
Xaut_3232
KEGG: bbt:BBta_5236 hypothetical protein.
  
     0.652
Xaut_4123
KEGG: rpd:RPD_1641 hypothetical protein.
 
   
 0.646
Xaut_2033
PFAM: protein of unknown function DUF1150; KEGG: bbt:BBta_0116 hypothetical protein.
  
     0.625
Xaut_4649
PFAM: Invasion associated locus B family protein; KEGG: bja:bll1169 hypothetical protein.
  
     0.603
Xaut_3207
KEGG: bra:BRADO2941 hypothetical protein.
  
     0.562
Xaut_0036
KEGG: nha:Nham_1124 hypothetical protein.
 
   
 0.557
Xaut_3484
KEGG: rpb:RPB_3925 hypothetical protein.
 
   
 0.549
Xaut_2067
PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rpc:RPC_3978 protein of unknown function DUF882.
  
     0.539
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.