STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1432PFAM: NAD-glutamate dehydrogenase; KEGG: bja:blr7995 hypothetical protein. (1611 aa)    
Predicted Functional Partners:
Xaut_0477
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bov:BOV_A0049 glutamate synthase, large subunit.
     
 0.938
Xaut_3449
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.933
Xaut_0476
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll3029 glutamate synthase (NADPH) small chain.
     
 0.911
Xaut_0887
PFAM: glutamine synthetase catalytic region; KEGG: mlo:mll5148 probable glutamine synthetase.
     
 0.907
Xaut_1141
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sme:SMb20745 putative glutatmine synthetase II protein.
     
 0.907
glsA-2
PFAM: cyclic nucleotide-binding; Sulfate transporter/antisigma-factor antagonist STAS; glutaminase; KEGG: bja:bll4798 putative glutaminase; Belongs to the glutaminase family.
     
 0.907
Xaut_1939
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: glutamine synthetase family protein.
     
 0.907
Xaut_2336
PFAM: glutamine synthetase catalytic region; KEGG: csa:Csal_1181 glutamate--ammonia ligase.
     
 0.907
Xaut_3585
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4949 glutamine synthetase I.
     
 0.907
Xaut_1080
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mes:Meso_1451 nitrite reductase (NAD(P)H), large subunit.
    
  0.905
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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