STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_1439PFAM: inner-membrane translocator; KEGG: eba:ebA3425 possible ABC transporter, permease protein precursor; Belongs to the binding-protein-dependent transport system permease family. (330 aa)    
Predicted Functional Partners:
Xaut_1438
PFAM: inner-membrane translocator; KEGG: mag:amb2326 branched-chain amino acid ABC-type transport system, permease components.
 
 0.999
Xaut_2705
PFAM: inner-membrane translocator; KEGG: bja:bll3662 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.982
Xaut_0429
PFAM: inner-membrane translocator; KEGG: vei:Veis_4700 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.980
Xaut_1435
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rme:Rmet_3520 ABC transporter-related protein.
  
 0.980
Xaut_1574
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0025 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.977
Xaut_1353
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_1013 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.968
Xaut_1619
PFAM: inner-membrane translocator; KEGG: bov:BOV_A0336 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.953
Xaut_1576
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0027 branched-chain amino acid ABC transporter, ATP-binding protein.
  
 0.950
Xaut_1563
PFAM: inner-membrane translocator; KEGG: ade:Adeh_2425 ABC branched-chain amino acid transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
  
 0.947
Xaut_1436
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb2328 ABC-type branched-chain amino acid transport systems, ATPase component.
  
 0.944
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.