Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Xaut_1450 | Xaut_1451 | Xaut_1450 | Xaut_1451 | Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bra:BRADO6680 putative two-component transcriptional regulator, LuxR family. | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | 0.522 |
Xaut_1451 | Xaut_1450 | Xaut_1451 | Xaut_1450 | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bra:BRADO6680 putative two-component transcriptional regulator, LuxR family. | 0.522 |
Xaut_1451 | Xaut_1452 | Xaut_1451 | Xaut_1452 | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: fal:FRAAL0539 conserved hypothetical protein, putative esterase/lipase domain. | 0.534 |
Xaut_1451 | ackA | Xaut_1451 | Xaut_3252 | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.483 |
Xaut_1451 | nnrD | Xaut_1451 | Xaut_3587 | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | 0.407 |
Xaut_1452 | Xaut_1451 | Xaut_1452 | Xaut_1451 | PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: fal:FRAAL0539 conserved hypothetical protein, putative esterase/lipase domain. | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | 0.534 |
ackA | Xaut_1451 | Xaut_3252 | Xaut_1451 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | 0.483 |
nnrD | Xaut_1451 | Xaut_3587 | Xaut_1451 | Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] | PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein. | 0.407 |