Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Xaut_2007TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rpc:RPC_1050 acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (376 aa)    
Predicted Functional Partners:
Xaut_0624
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pde:Pden_3225 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.984
Xaut_4444
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: swi:Swit_3796 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.983
Xaut_0906
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pna:Pnap_2135 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.981
Xaut_0915
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: pde:Pden_0201 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.981
Xaut_2157
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bja:blr1379 3-hydroxybutyryl-CoA dehydrogenase.
 
 0.966
Xaut_0183
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: abo:ABO_2533 acyl-CoA dehydrogenase, putative.
  
 0.944
Xaut_1346
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_B2584 putative acyl-CoA dehydrogenase.
  
 0.944
Xaut_4077
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpe:RPE_0889 acyl-CoA dehydrogenase domain protein.
  
 0.944
Xaut_4666
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpd:RPD_3106 acyl-CoA dehydrogenase-like.
  
 0.944
Xaut_4425
TIGRFAM: citrate synthase I; PFAM: Citrate synthase; KEGG: bov:BOV_1106 citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 0.938
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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