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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2010TIGRFAM: Alcohol dehydrogenase zinc-binding type 2; PFAM: oxidoreductase domain protein; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bov:BOV_1026 alcohol dehydrogenase, zinc-containing. (327 aa)    
Predicted Functional Partners:
Xaut_2610
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMc03929 putative zinc-type alcohol dehydrogenase transmembrane protein.
 
0.961
Xaut_0366
PFAM: aldehyde dehydrogenase; KEGG: bme:BMEI1747 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
Xaut_1357
PFAM: aldehyde dehydrogenase; KEGG: bra:BRADO5849 NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
Xaut_3504
PFAM: aldehyde dehydrogenase; KEGG: bra:BRADO2102 aldehyde dehydrogenase family 7 member A1 homolog; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
Xaut_0102
PFAM: amine oxidase; KEGG: bbt:BBta_2164 putative amine oxidase.
    
  0.902
Xaut_1419
PFAM: amine oxidase; KEGG: bbt:BBta_0261 hypothetical protein.
    
  0.902
Xaut_4040
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: acr:Acry_2976 alcohol dehydrogenase, zinc-binding domain protein.
 
 0.712
Xaut_3143
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: bra:BRADO3367 putative bifunctional enzyme: malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal).
  
  
 0.619
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
  
 0.571
Xaut_0383
Beta-ketoacyl synthase; PFAM: condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: nfa:nfa30250 putative polyketide synthase.
  
 
 0.517
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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