STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2069Two component transcriptional regulator, Fis family; PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: bbt:BBta_6863 putative response regulator in two-component regulatory system, sigma 54-dependent. (254 aa)    
Predicted Functional Partners:
Xaut_0632
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: eba:ebA6722 histidine kinase.
 
 
 0.846
Xaut_1406
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_3045 putative sensor histidine kinase with a PAS domain.
 
 
 0.822
Xaut_3322
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mlo:mlr0562 histidine kinase sensor protein.
 
 
 0.821
Xaut_3859
PFAM: response regulator receiver; KEGG: nha:Nham_2443 response regulator receiver domain protein (CheY-like).
 
 
 0.812
Xaut_1033
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_4887 sensor histidine kinase.
 
 
 0.807
Xaut_0196
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpb:RPB_0775 periplasmic sensor signal transduction histidine kinase.
 
 
 0.794
Xaut_1551
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pde:Pden_1124 histidine kinase.
 
 
 0.793
Xaut_2427
PFAM: response regulator receiver; KEGG: pde:Pden_5113 response regulator receiver protein.
 
 
 0.789
Xaut_0202
Two component transcriptional regulator, winged helix family; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bbt:BBta_1991 response regulator in two-component regulatory system with PhoR (or CreC).
 
 
 0.786
Xaut_3388
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sme:SMa0939 probable sensor histidine kinase of two-component system.
 
 
 
 0.784
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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