STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2151PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5853 putative permease protein. (272 aa)    
Predicted Functional Partners:
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
  
 0.956
Xaut_2150
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5852 putative molybdenum transport system permease protein ModB.
 
    0.950
Xaut_2149
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_1270 ABC transporter related; Belongs to the ABC transporter superfamily.
     0.938
Xaut_2152
KEGG: rpb:RPB_4046 putative periplasmic solute-binding protein.
 
     0.894
cpdA
Metallophosphoesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.872
cysA
Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
  
 0.848
Xaut_1394
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rme:Rmet_1369 thiosulphate-binding protein.
  
  
 0.744
Xaut_1399
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: rpc:RPC_4016 phosphoadenosine phosphosulfate reductase.
  
  
 0.730
Xaut_2331
TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; KEGG: rpd:RPD_1378 thiosulphate-binding protein.
  
  
 0.717
Xaut_2217
TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_2654 sulfate ABC transporter, permease protein.
 
  
0.657
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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