STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2450PFAM: OsmC family protein; KEGG: rpb:RPB_1421 OsmC-like protein. (143 aa)    
Predicted Functional Partners:
Xaut_4157
PFAM: Ferritin Dps family protein; KEGG: nwi:Nwi_2447 ferritin and Dps; Belongs to the Dps family.
 
  
 0.595
Xaut_2025
KEGG: mlo:mll3692 hypothetical protein.
   
  
 0.527
Xaut_1151
KEGG: bch:Bcen2424_1947 hypothetical protein.
  
  
 0.493
Xaut_1721
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.484
Xaut_2717
PFAM: aldo/keto reductase; KEGG: atc:AGR_L_1141 hypothetical protein.
  
  
 0.480
Xaut_2922
PFAM: superoxide dismutase copper/zinc binding; KEGG: azo:azo0522 superoxide dismutase.
  
  
 0.472
Xaut_1277
PFAM: isochorismatase hydrolase; KEGG: sme:SMa1821 hypothetical protein.
  
    0.452
Xaut_4255
PFAM: aldo/keto reductase; KEGG: sth:STH658 oxidoreductase.
  
  
 0.446
Xaut_2491
PFAM: CsbD family protein; KEGG: rpa:RPA4217 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.438
Xaut_2321
PFAM: Catalase domain protein; KEGG: bov:BOV_A0322 catalase.
  
  
 0.412
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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