STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2733PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mes:Meso_2027 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (432 aa)    
Predicted Functional Partners:
Xaut_3492
TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mes:Meso_1162 putative agmatinase; Belongs to the arginase family.
 
 
 0.938
Xaut_2119
PFAM: Spermine synthase; KEGG: bra:BRADO6330 putative spermine/spermidine synthase family protein.
  
 0.929
Xaut_3506
PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: pol:Bpro_2024 ornithine cyclodeaminase.
  
 
 0.926
Xaut_2140
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mlo:mll2974 ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
  
 
0.924
Xaut_0640
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rpe:RPE_3166 ornithine decarboxylase.
    
 0.915
Xaut_2727
PFAM: aminotransferase class-III; KEGG: aha:AHA_4139 aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.907
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.529
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.526
Xaut_4343
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: mes:Meso_2227 NAD(P)H dehydrogenase (quinone).
    
  0.521
msrP
Oxidoreductase molybdopterin binding; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce b [...]
       0.494
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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