STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2847HPr kinase; KEGG: rpb:RPB_0465 HPr kinase. (149 aa)    
Predicted Functional Partners:
Xaut_2846
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rpa:RPA0357 two component sensor histidine kinase.
 
     0.837
Xaut_2848
PFAM: PTS system fructose subfamily IIA component; KEGG: rpc:RPC_0594 PTS system fructose subfamily IIA component.
 
  
 0.766
Xaut_2849
TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: nha:Nham_0439 HPrNtr.
   
 
 0.740
Xaut_2845
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpe:RPE_0821 two component transcriptional regulator, winged helix family.
     
 0.680
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
  
 0.622
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
  
 0.599
Xaut_1665
KEGG: rpa:RPA3501 hypothetical protein.
  
     0.595
Xaut_2557
PFAM: regulatory protein MarR; KEGG: rpb:RPB_4174 transcriptional regulator, MarR family.
  
 
 
 0.562
Xaut_2418
PFAM: ROK family protein; KEGG: sme:SMc02172 putative transcription regulator protein.
   
 
 0.532
Xaut_1171
PFAM: protein of unknown function DUF1159; KEGG: rpe:RPE_4435 protein of unknown function DUF1159.
  
     0.488
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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