STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2895PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nha:Nham_4624 protein of unknown function DUF395, YeeE/YedE. (141 aa)    
Predicted Functional Partners:
Xaut_2894
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: nha:Nham_4623 protein of unknown function DUF395, YeeE/YedE.
   
 0.991
Xaut_2893
PFAM: protein of unknown function DUF81; KEGG: nha:Nham_4622 protein of unknown function DUF81.
    
 0.829
Xaut_2892
PFAM: beta-lactamase domain protein; KEGG: nha:Nham_4621 beta-lactamase-like.
 
     0.812
Xaut_2891
PFAM: Rhodanese domain protein; KEGG: nha:Nham_4620 rhodanese-like.
  
    0.724
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
    0.495
Xaut_4368
PFAM: SirA family protein; KEGG: nha:Nham_2937 SirA-like; Belongs to the sulfur carrier protein TusA family.
  
  
 0.490
Xaut_2896
PFAM: regulatory protein ArsR; KEGG: rpc:RPC_3223 transcriptional regulator, ArsR family.
       0.455
Xaut_2890
PFAM: protein of unknown function DUF302; KEGG: bja:blr5777 hypothetical protein.
       0.444
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.