STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3031PFAM: ParB domain protein nuclease; KEGG: pde:Pden_1541 ParB-like partition proteins. (712 aa)    
Predicted Functional Partners:
Xaut_3025
KEGG: bbt:BBta_7718 hypothetical protein.
 
     0.830
Xaut_3024
KEGG: pde:Pden_1531 hypothetical protein.
 
     0.812
Xaut_0718
KEGG: pde:Pden_1531 hypothetical protein.
 
     0.774
Xaut_0572
KEGG: bja:bll0064 hypothetical protein.
 
     0.771
Xaut_4023
KEGG: bbt:BBta_7719 hypothetical protein.
 
     0.771
Xaut_4024
KEGG: bja:bll0064 hypothetical protein.
 
     0.771
Xaut_4580
KEGG: bja:bll0064 hypothetical protein.
 
     0.771
Xaut_4581
KEGG: bbt:BBta_7719 hypothetical protein.
 
     0.771
Xaut_0573
KEGG: bbt:BBta_7719 hypothetical protein.
 
     0.770
Xaut_0769
KEGG: bbt:BBta_7719 hypothetical protein.
 
     0.770
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.