STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3044KEGG: swi:Swit_5200 putative nitric-oxide reductase. (767 aa)    
Predicted Functional Partners:
Xaut_1523
KEGG: rpd:RPD_4257 hypothetical protein.
  
 
 0.983
Xaut_3041
KEGG: sal:Sala_0535 truncated hemoglobin-like protein.
 
   
 0.774
Xaut_3043
KEGG: swi:Swit_5201 hypothetical protein.
 
     0.760
Xaut_3042
PFAM: Protein of unknown function DUF1971; KEGG: swi:Swit_5202 protein of unknown function DUF1971.
       0.728
Xaut_0462
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.715
Xaut_0386
KEGG: sde:Sde_1587 pseudouridine synthase, RluD.
 
 
 0.657
Xaut_1877
TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5; KEGG: nha:Nham_0498 cobalt chelatase, pCobS small subunit.
  
  
 0.657
Xaut_3040
TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sal:Sala_0536 transcriptional regulator, BadM/Rrf2 family.
     
 0.653
Xaut_1071
Gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; KEGG: rpa:RPA2003 probable cytochrome c precursor.
  
 
 0.587
Xaut_4209
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cytochrome c class I; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rpb:RPB_1669 pyrroloquinoline-quinone aldehyde dehydrogenase.
  
 
 0.584
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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