STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3101PFAM: thioesterase superfamily protein; KEGG: hne:HNE_1462 thioesterase family protein. (162 aa)    
Predicted Functional Partners:
sfsA
PFAM: sugar fermentation stimulation protein; KEGG: mag:amb1604 DNA-binding protein; Belongs to the SfsA family.
       0.773
Xaut_1866
KEGG: mag:amb3594 coenzyme F390 synthetase.
 
  
 0.645
Xaut_0383
Beta-ketoacyl synthase; PFAM: condensation domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: nfa:nfa30250 putative polyketide synthase.
  
 
 0.540
Xaut_1007
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; KEGG: mxa:MXAN_4526 polyketide synthase type I.
  
 
 0.540
Xaut_3805
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: sme:SMc02273 fatty acid synthase transmembrane protein.
  
 
 0.540
Xaut_3098
PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: rpd:RPD_0158 peptidase U6, penicillin-insensitive murein endopeptidase.
       0.528
Xaut_3099
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: pae:PA0732 hypothetical protein.
       0.528
Xaut_1861
PFAM: AMP-dependent synthetase and ligase; KEGG: rpe:RPE_4227 AMP-dependent synthetase and ligase.
 
   
 0.476
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.470
Xaut_3102
PFAM: small multidrug resistance protein; KEGG: mxa:MXAN_5186 transporter, small multidrug resistance (SMR) family.
       0.459
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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