STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3207KEGG: bra:BRADO2941 hypothetical protein. (69 aa)    
Predicted Functional Partners:
Xaut_3232
KEGG: bbt:BBta_5236 hypothetical protein.
 
     0.673
Xaut_1938
KEGG: rpb:RPB_0547 hypothetical protein.
  
     0.657
Xaut_3489
KEGG: rpd:RPD_3670 flagellar export FliJ.
  
     0.653
Xaut_0454
PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpe:RPE_2325 transglutaminase family protein cysteine peptidase, BTLCP.
  
     0.631
Xaut_4381
PFAM: SmpA/OmlA domain protein; KEGG: nha:Nham_1582 SmpA/OmlA.
  
     0.602
Xaut_1636
KEGG: bja:bll5549 hypothetical protein.
  
     0.587
Xaut_3208
TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; KEGG: rpa:RPA3429 serine acetyltransferase.
       0.580
Xaut_1477
KEGG: rpd:RPD_1242 hypothetical protein.
  
     0.575
Xaut_1367
PFAM: metallophosphoesterase; KEGG: rpb:RPB_4196 metallophosphoesterase.
  
     0.562
Xaut_3209
PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO2938 putative hydrolase.
 
     0.562
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.