STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3227TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; KEGG: bja:blr3778 phospho-2-dehydro-3-deoxyheptonate aldolase. (478 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase., 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
 
  
 0.953
Xaut_0395
PFAM: Chorismate mutase; KEGG: rpe:RPE_4341 chorismate mutase.
   
 
 0.878
Xaut_1535
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rru:Rru_A0595 transketolase; Belongs to the transketolase family.
     
 0.812
Xaut_1913
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: azo:azo2836 putative transketolase; Belongs to the transketolase family.
     
 0.812
Xaut_3074
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.812
Xaut_1539
PFAM: Transketolase central region; Transketolase domain protein; KEGG: bbt:BBta_3269 putative transketolase, beta-subunit.
     
  0.800
Xaut_1540
PFAM: Transketolase domain protein; KEGG: bbt:BBta_3268 putative transketolase, alpha subunit.
     
  0.800
Xaut_1712
PFAM: Transketolase domain protein; KEGG: vei:Veis_0900 transketolase domain protein.
     
  0.800
Xaut_1713
PFAM: Transketolase central region; Transketolase domain protein; KEGG: vei:Veis_0901 transketolase, central region.
     
  0.800
Xaut_1912
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
     
  0.800
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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