STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3266PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: nwi:Nwi_0637 acyl-CoA dehydrogenase. (596 aa)    
Predicted Functional Partners:
Xaut_0908
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pnu:Pnuc_1558 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
Xaut_1700
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: swi:Swit_1014 enoyl-CoA hydratase/isomerase.
  
 0.945
Xaut_3308
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ppf:Pput_3521 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
Xaut_4296
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mag:amb3583 enoyl-CoA hydratase/carnithine racemase.
  
 0.945
Xaut_1857
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: bxe:Bxe_B0961 propionyl-CoA carboxylase.
  
 
 0.924
Xaut_1855
Carbamoyl-phosphate synthase L chain ATP-binding; PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: gme:Gmet_3292 biotin/lipoyl attachment:carbamoyl-phosphate synthase L chain, ATP-binding:carbamoyl-phosphate synthetase large chain-like:biotin carboxylase-like.
  
 0.919
Xaut_4077
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpe:RPE_0889 acyl-CoA dehydrogenase domain protein.
 
  
  0.915
Xaut_0183
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: abo:ABO_2533 acyl-CoA dehydrogenase, putative.
  
  
 
0.910
Xaut_3449
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.908
Xaut_4712
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_2451 glutaryl-CoA dehydrogenase.
  
  
 
0.907
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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